APEMoST

APEMoST Documentation

This is the code documentation of APEMoST, the Automated Parameter Estimation and Model Selection Toolkit.

You can find more information about it in its documentation.

Compile-time parameters

Instead of adjusting parameters in files (which would cause a lot of unnecessary versions), you should pass the parameters to the compiler. This includes decisions on which algorithm to use, as well as fine- tuning values like number of burn-in iterations.

Do it like this:
$ CCFLAGS="-DN_PARAMETERS=3 -DDEBUG" make simplesin.exe

The possible parameters and their values:

Fine-tuning the algorithm

Defining algorithm behaviour

Running

Analyzing

Others

Runtime parameters

At runtime, the program looks for the files PARAMS_FILENAME and DATA_FILENAME.

Really, read the manual.